Korbel, Jan O.: search on Z-Library

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1

Predicting collapse of adaptive networked systems without knowing the network

Horstmeyer, Leonhard, Pham, Tuan Minh, Korbel, Jan, Thurner, Stefan

Journal:

Scientific Reports

Year:

2020

Language:

english

File:

PDF, 2.18 MB

english, 2020

2

When Shannon and Khinchin meet Shore and Johnson: Equivalence of information theory and statistical inference axiomatics

Jizba, Petr, Korbel, Jan

Journal:

Physical Review E

Year:

2020

File:

PDF, 243 KB

2020

3

Patterns of somatic structural variation in human cancer genomes

Li, Yilong, Roberts, Nicola D., Wala, Jeremiah A., Shapira, Ofer, Schumacher, Steven E., Kumar, Kiran, Khurana, Ekta, Waszak, Sebastian, Korbel, Jan O., Haber, James E., Imielinski, Marcin, Weischenfe

Journal:

Year:

2020

File:

PDF, 34.88 MB

2020

4

Transitions between superstatistical regimes: Validity, breakdown and applications

Jizba, Petr, Korbel, Jan, Lavička, Hynek, Prokš, Martin, Svoboda, Václav, Beck, Christian

Journal:

Physica A: Statistical Mechanics and its Applications

Year:

2018

Language:

english

File:

PDF, 814 KB

english, 2018

5

Targeted Perturb-seq enables genome-scale genetic screens in single cells

Schraivogel, Daniel, Gschwind, Andreas R., Milbank, Jennifer H., Leonce, Daniel R., Jakob, Petra, Mathur, Lukas, Korbel, Jan O., Merten, Christoph A., Velten, Lars, Steinmetz, Lars M.

Journal:

Year:

2020

File:

PDF, 7.84 MB

2020

6

Information geometry of scaling expansions of non-exponentially growing configuration spaces

Korbel, Jan, Hanel, Rudolf, Thurner, Stefan

Journal:

The European Physical Journal Special Topics

Year:

2020

File:

PDF, 635 KB

2020

7

Information Geometric Duality of ϕ-Deformed Exponential Families

Korbel, Jan, Hanel, Rudolf, Thurner, Stefan

Journal:

Year:

2019

Language:

english

File:

PDF, 1.56 MB

english, 2019

8

On q-non-extensive statistics with non-Tsallisi

Jizba, Petr, Korbel, Jan

Journal:

Physica A: Statistical Mechanics and its Applications

Year:

2016

Language:

english

File:

PDF, 557 KB

english, 2016

9

Criteria for Inference of Chromothripsis in Cancer Genomes

Korbel, Jan O., Campbell, Peter J.

Journal:

Year:

2013

Language:

english

File:

PDF, 1.74 MB

english, 2013

10

Modeling of financial processes with a space-time fractional diffusion equation of varying order

Korbel, Jan, Luchko, Yuri

Journal:

Fractional Calculus and Applied Analysis

Year:

2016

Language:

english

File:

PDF, 354 KB

english, 2016

11

Data analysis: Create a cloud commons

Stein, Lincoln D., Knoppers, Bartha M., Campbell, Peter, Getz, Gad, Korbel, Jan O.

Journal:

Year:

2015

Language:

english

File:

PDF, 1.79 MB

english, 2015

12

New structural and mechanical features of hexagonal materials after room temperature extrusion using the KoBo method

Korbel, Andrzej, Pospiech, Jan, Bochniak, Włodzimierz, Tarasek, Anna, Ostachowski, Pawel, Bonarski, Jan

Journal:

International Journal of Materials Research (formerly Zeitschrift fuer Metallkunde)

Year:

2011

Language:

english

File:

PDF, 1.37 MB

english, 2011

13

Acquisition of chromosome instability is a mechanism to evade oncogene addiction

Salgueiro, Lorena, Buccitelli, Christopher, Rowald, Konstantina, Somogyi, Kalman, Kandala, Sridhar, Korbel, Jan O, Sotillo, Rocio

Journal:

EMBO Molecular Medicine

Year:

2020

Language:

english

File:

PDF, 5.67 MB

english, 2020

14

Redox signals at the ER –mitochondria interface control melanoma progression

Zhang, Xin, Gibhardt, Christine S, Will, Thorsten, Stanisz, Hedwig, Körbel, Christina, Mitkovski, Miso, Stejerean, Ioana, Cappello, Sabrina, Pacheu‐Grau, David, Dudek, Jan, Tahbaz, Nasser, Mina, Lucas

Journal:

The EMBO Journal

Year:

2019

Language:

english

File:

PDF, 3.35 MB

english, 2019

15

Genome assembly and haplotyping with Hi-C

Korbel, Jan O, Lee, Charles

Journal:

Nature Biotechnology

Year:

2013

Language:

english

File:

PDF, 279 KB

english, 2013

16

Strand-seq enables reliable separation of long reads by chromosome via expectation maximization

Ghareghani, Maryam, Porubskỳ, David, Sanders, Ashley D, Meiers, Sascha, Eichler, Evan E, Korbel, Jan O, Marschall, Tobias

Journal:

Year:

2018

Language:

english

File:

PDF, 993 KB

english, 2018

17

Point Information Gain and Multidimensional Data Analysis

Rychtáriková, Renata, Korbel, Jan, Macháček, Petr, Císař, Petr, Urban, Jan, Štys, Dalibor

Journal:

Year:

2016

Language:

english

File:

PDF, 4.23 MB

english, 2016

18

Systematic Association of Genes to Phenotypes by Genome and Literature Mining

Korbel, Jan O., Doerks, Tobias, Jensen, Lars J., Perez-Iratxeta, Carolina, Kaczanowski, Szymon, Hooper, Sean D., Andrade, Miguel A., Bork, Peer

Journal:

Year:

2005

Language:

english

File:

PDF, 571 KB

english, 2005

19

Genomes of early onset prostate cancer

Weischenfeldt, Joachim, Korbel, Jan O.

Journal:

Current Opinion in Urology

Year:

2017

Language:

english

File:

PDF, 420 KB

english, 2017

20

-log-likelihood estimation

Çankaya, Mehmet Niyazi, Korbel, Jan

Journal:

Physica A: Statistical Mechanics and its Applications

Year:

2018

Language:

english

File:

PDF, 308 KB

english, 2018

21

Use of pathway analysis and genome context methods for functional genomics of Mycoplasma pneumoniae nucleotide metabolism

Mikhail Pachkov, Thomas Dandekar, Jan Korbel, Peer Bork, Stefan Schuster

Journal:

Year:

2007

Language:

english

File:

PDF, 621 KB

english, 2007

22

Negative Selection and Chromosome Instability Induced by Mad2 Overexpression Delay Breast Cancer but Facilitate Oncogene-Independent Outgrowth

Rowald, Konstantina, Mantovan, Martina, Passos, Joana, Buccitelli, Christopher, Mardin, Balca R., Korbel, Jan O., Jechlinger, Martin, Sotillo, Rocio

Journal:

Year:

2016

Language:

english

File:

PDF, 4.49 MB

english, 2016

23

Dense and accurate whole-chromosome haplotyping of individual genomes

Porubsky, David, Garg, Shilpa, Sanders, Ashley D., Korbel, Jan O., Guryev, Victor, Lansdorp, Peter M., Marschall, Tobias

Journal:

Nature Communications

Year:

2017

Language:

english

File:

PDF, 1.29 MB

english, 2017

24

Challenges in studying genomic structural variant formation mechanisms: The short-read dilemma and beyond

Megumi Onishi-Seebacher, Jan O. Korbel

Journal:

Year:

2011

Language:

english

File:

PDF, 224 KB

english, 2011

25

Efficiency and Power as a Function of Sequence Coverage, SNP Array Density, and Imputation

Flannick, Jason, Korn, Joshua M., Fontanillas, Pierre, Grant, George B., Banks, Eric, Depristo, Mark A., Altshuler, David, Korbel, Jan

Journal:

PLoS Computational Biology

Year:

2012

Language:

english

File:

PDF, 1.08 MB

english, 2012

26

Simple Formulas for Pricing and Hedging European Options in the Finite Moment Log-Stable Model

Aguilar, Jean-Philippe, Korbel, Jan

Journal:

Year:

2019

Language:

english

File:

PDF, 806 KB

english, 2019

27

Publisher Correction: Butler enables rapid cloud-based analysis of thousands of human genomes

Yakneen, Sergei, Waszak, Sebastian M., Gertz, Michael, Korbel, Jan O.

Journal:

Nature Biotechnology

Year:

2020

Language:

english

File:

PDF, 671 KB

english, 2020

28

VISOR: a versatile haplotype-aware structural variant simulator for short and long read sequencing

Bolognini, Davide, Sanders, Ashley, Korbel, Jan O, Magi, Alberto, Benes, Vladimir, Rausch, Tobias, Berger, Bonnie

Journal:

Year:

2019

Language:

english

File:

PDF, 116 KB

english, 2019

29

Information Geometric Duality of ϕ-Deformed Exponential Families

Korbel, Jan, Hanel, Rudolf, Thurner, Stefan

Journal:

Year:

2019

File:

PDF, 1.56 MB

2019

30

Multifractal diffusion entropy analysis: Optimal bin width of probability histograms

Jizba, Petr, Korbel, Jan

Journal:

Physica A: Statistical Mechanics and its Applications

Year:

2014

Language:

english

File:

PDF, 1011 KB

english, 2014

31

Prevalence of chromosomal rearrangements involving non-ETS genes in prostate cancer

Kluth, Martina, Galal, Rami, Krohn, Antje, Weischenfeldt, Joachim, Tsourlakis, Christina, Paustian, Lisa, Ahrary, Ramin, Ahmed, Malik, Scherzai, Sekander, Meyer, Anne, Sirma, Hï¿½seyin, Korbel, Jan, S

Journal:

International Journal of Oncology

Year:

2015

Language:

english

File:

PDF, 286 KB

english, 2015

32

Remarks on “Comments on ‘On q-non-extensive stat

Jizba, Petr, Korbel, Jan

Journal:

Physica A: Statistical Mechanics and its Applications

Year:

2016

File:

PDF, 3.92 MB

2016

33

Alfred: Interactive multi-sample BAM alignment statistics, feature counting and feature annotation for long- and short-read sequencing

Rausch, Tobias, Fritz, Markus Hsi-Yang, Korbel, Jan O, Benes, Vladimir, Birol, Inanc

Journal:

Year:

2018

Language:

english

File:

PDF, 167 KB

english, 2018

34

Phenotypic impact of genomic structural variation: insights from and for human disease

Weischenfeldt, Joachim, Symmons, Orsolya, Spitz, François, Korbel, Jan O.

Journal:

Nature Reviews Genetics

Year:

2013

Language:

english

File:

PDF, 907 KB

english, 2013

35

Systematic Identification of Determinants for Single Strand Annealing Mediated Deletion Formation in Saccharomyces cerevisiae

Segura-Wang, Maia, Onishi-Seebacher, Megumi, Stütz, Adrian M., Mardin, Balca R., Korbel, Jan O.

Journal:

G3 Genes|Genome|Genetics

Year:

2017

Language:

english

File:

PDF, 764 KB

english, 2017

36

TRiCoLOR: tandem repeat profiling using whole-genome long-read sequencing data

Bolognini, Davide, Magi, Alberto, Benes, Vladimir, Korbel, Jan O, Rausch, Tobias

Journal:

Year:

2020

File:

PDF, 836 KB

2020

37

Identification of ZCCHC8 as fusion partner of ROS1 in a case of congenital glioblastoma multiforme with a t(6;12)(q21;q24.3)

Coccé, Mariela C., Mardin, Balca R., Bens, Susanne, Stütz, Adrian M., Lubieniecki, Fabiana, Vater, Inga, Korbel, Jan O., Siebert, Reiner, Alonso, Cristina N., Gallego, Marta S.

Journal:

Genes, Chromosomes and Cancer

Year:

2016

Language:

english

File:

PDF, 597 KB

english, 2016

38

Computing patient data in the cloud: practical and legal considerations for genetics and genomics research in Europe and internationally

Fruzsina Molnár-Gábor,Rupert Lueck,Sergei Yakneen,Jan O. Korbel

Journal:

Genome Medicine

Year:

2017

Language:

english

File:

PDF, 408 KB

english, 2017

39

Transfer Entropy between Communities in Complex Financial Networks

Korbel, Jan, Jiang, Xiongfei, Zheng, Bo

Journal:

Year:

2019

Language:

english

File:

PDF, 455 KB

english, 2019

40

A scalable CRISPR/Cas9-based fluorescent reporter assay to study DNA double-strand break repair choice

Roidos, Paris, Sungalee, Stephanie, Benfatto, Salvatore, SerÃ§in, Ãzdemirhan, StÃ¼tz, Adrian M., Abdollahi, Amir, Mauer, Jan, Zenke, Frank T., Korbel, Jan O., Mardin, Balca R.

Journal:

Nature Communications

Year:

2020

File:

PDF, 5.66 MB

2020

41

Rescaling the nonadditivity parameter in Tsallis thermostatistics

Journal:

Physics Letters A

Year:

2017

Language:

english

File:

PDF, 265 KB

english, 2017

42

Effects of the COVID-19 pandemic on life scientists

Korbel, Jan O., Stegle, Oliver

Journal:

Year:

2020

File:

PDF, 658 KB

2020

43

Scimitar syndrome – A case report

Bujdák, Juraj, Vondrák, Jiří, Matějka, Jan, Král, Pavel, Korbel, Bořivoj

Journal:

Year:

2018

Language:

english

File:

PDF, 1.77 MB

english, 2018

44

Series representation of the pricing formula for the European option driven by space-time fractional diffusion

Aguilar, Jean-Philippe, Coste, Cyril, Korbel, Jan

Journal:

Fractional Calculus and Applied Analysis

Year:

2018

Language:

english

File:

PDF, 573 KB

english, 2018

45

Data analysis: Create a cloud commons

Stein, Lincoln D., Knoppers, Bartha M., Campbell, Peter, Getz, Gad, Korbel, Jan O.

Journal:

Year:

2015

File:

PDF, 1.79 MB

2015

46

Calcium dysregulation in ventricular myocytes from mice expressing constitutively active Rac1

Oberhofer, Martin, Tian, Qinghai, Ruppenthal, Sandra, Wegener, Silke, Reil, Jan-Christian, Körbel, Christina, Hammer, Karin, Menger, Michael, Neuberger, Hans-Ruprecht, Kaestner, Lars, Lipp, Peter

Journal:

Year:

2013

Language:

english

File:

PDF, 2.01 MB

english, 2013

47

The Baker's Yeast Diploid Genome Is Remarkably Stable in Vegetative Growth and Meiosis

Nishant, K. T., Wei, Wu, Mancera, Eugenio, Argueso, Juan Lucas, Schlattl, Andreas, Delhomme, Nicolas, Ma, Xin, Bustamante, Carlos D., Korbel, Jan O., Gu, Zhenglong, Steinmetz, Lars M., Alani, Eric, Ji

Journal:

Year:

2010

Language:

english

File:

PDF, 1.36 MB

english, 2010

48

Transgene methylation in mice reflects copy number but not expression level

Ramona N. Pena, John Webster, Stephen Kwan, Jan Korbel, Bruce A. Whitelaw

Journal:

Molecular Biotechnology

Year:

2004

Language:

english

File:

PDF, 232 KB

english, 2004

49

A 15q24 microdeletion in transient myeloproliferative disease (TMD) and acute megakaryoblastic leukaemia (AMKL) implicates PML and SUMO3 in the leukaemogenesis of TMD/AMKL

Susanne Haemmerling, Wolfgang Behnisch, Tobias Doerks, Jan O. Korbel, Peer Bork, Ute Moog, Sabine Hentze, Ute Grasshoff, Michael Bonin, Olaf Rieß, Johannes W. G. Janssen, Anna Jauch, Claus R. Bartram,

Journal:

British Journal of Haematology

Year:

2012

Language:

english

File:

PDF, 442 KB

english, 2012

50

Extracting information from cDNA arrays

Herzel, Hanspeter, Beule, Dieter, Kielbasa, Szymon, Korbel, Jan, Sers, Christine, Malik, Arif, Eickhoff, Holger, Lehrach, Hans, Schuchhardt, Johannes

Journal:

Chaos An Interdisciplinary Journal of Nonlinear Science

Year:

2001

Language:

english

File:

PDF, 671 KB

english, 2001

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